ISM_15560 protein (Roseovarius nubinhibens) - STRING interaction network

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Score

ISM_15560

Hypothetical protein. (168 aa)

Predicted Functional Partners:

rplS

0.845

rpsE

0.834

rpsJ

0.834

rplQ

0.833

rpmJ

0.833

rpmF

0.833

rplB

0.832

rplO

0.831

rpsB

0.829

rpsI

0.829

Your Current Organism:

Roseovarius nubinhibens

NCBI taxonomy Id: 89187
Other names: R. nubinhibens ISM, Roseobacter sp. ISM, Roseovarius nubinhibens ISM, Roseovarius nubinhibens str. ISM, Roseovarius nubinhibens strain ISM, marine bacterium ISM

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ISM_15560	rplB	ISM_15560	ISM_01820	Hypothetical protein.	50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	0.832
ISM_15560	rplO	ISM_15560	ISM_01705	Hypothetical protein.	Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	0.831
ISM_15560	rplQ	ISM_15560	ISM_01670	Hypothetical protein.	COG0203 Ribosomal protein L17.	0.833
ISM_15560	rplS	ISM_15560	ISM_08780	Hypothetical protein.	50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.845
ISM_15560	rpmF	ISM_15560	ISM_16375	Hypothetical protein.	COG0333 Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.833
ISM_15560	rpmJ	ISM_15560	ISM_07155	Hypothetical protein.	COG0257 Ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family.	0.833
ISM_15560	rpsB	ISM_15560	ISM_15660	Hypothetical protein.	COG0052 Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.829
ISM_15560	rpsE	ISM_15560	ISM_01715	Hypothetical protein.	30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.	0.834
ISM_15560	rpsI	ISM_15560	ISM_16290	Hypothetical protein.	COG0103 Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.829
ISM_15560	rpsJ	ISM_15560	ISM_01845	Hypothetical protein.	30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.	0.834
rplB	ISM_15560	ISM_01820	ISM_15560	50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	Hypothetical protein.	0.832
rplB	rplO	ISM_01820	ISM_01705	50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	0.996
rplB	rplQ	ISM_01820	ISM_01670	50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	COG0203 Ribosomal protein L17.	0.995
rplB	rplS	ISM_01820	ISM_08780	50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.991
rplB	rpmF	ISM_01820	ISM_16375	50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	COG0333 Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.984
rplB	rpmJ	ISM_01820	ISM_07155	50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	COG0257 Ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family.	0.988
rplB	rpsB	ISM_01820	ISM_15660	50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	COG0052 Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.994
rplB	rpsE	ISM_01820	ISM_01715	50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.	0.998
rplB	rpsI	ISM_01820	ISM_16290	50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	COG0103 Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.996
rplB	rpsJ	ISM_01820	ISM_01845	50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.	0.998

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