Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ISM_15580Predicted ferripyochelin binding protein; COG0663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily. (175 aa)    
Predicted Functional Partners:
ISM_02360
Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
    
 0.824
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
  
    0.807
ISM_15570
yicC family protein; COG1561 Uncharacterized stress-induced protein.
       0.803
ISM_15585
Phosphate regulon sensor histidine kinase, putative; COG0642 Signal transduction histidine kinase.
       0.802
ISM_15565
Hypothetical protein.
       0.528
ISM_06815
Thioredoxin; COG0526 Thiol-disulfide isomerase and thioredoxins; Belongs to the thioredoxin family.
    
 
 0.463
ISM_07435
COG3118 Thioredoxin domain-containing protein.
    
 
 0.463
ISM_15590
COG0226 ABC-type phosphate transport system, periplasmic component.
       0.461
Your Current Organism:
Roseovarius nubinhibens
NCBI taxonomy Id: 89187
Other names: R. nubinhibens ISM, Roseobacter sp. ISM, Roseovarius nubinhibens ISM, Roseovarius nubinhibens str. ISM, Roseovarius nubinhibens strain ISM, marine bacterium ISM
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