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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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textmining
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experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ISM_15910ABC transporter, ATPase subunit; COG3842 ABC-type spermidine/putrescine transport systems, ATPase components; Belongs to the ABC transporter superfamily. (368 aa)    
Predicted Functional Partners:
ISM_01315
Ferric iron ABC transporter, permease protein; COG1178 ABC-type Fe3+ transport system, permease component.
 
 0.951
ISM_05125
Ferric iron ABC transporter, periplasmic ferric iron-binding protein; COG1840 ABC-type Fe3+ transport system, periplasmic component.
 
 
 0.883
ISM_04805
ABC spermidine/putrescine transporter, inner membrane subunit; COG1177 ABC-type spermidine/putrescine transport system, permease component II.
 
 0.877
ISM_04800
COG1176 ABC-type spermidine/putrescine transport system, permease component I.
 
 0.816
ISM_03965
COG1177 ABC-type spermidine/putrescine transport system, permease component II.
 
 0.813
ISM_08045
COG1177 ABC-type spermidine/putrescine transport system, permease component II.
 
 0.810
ISM_04455
Opine/polyamine ABC transporter, permease protein; COG1176 ABC-type spermidine/putrescine transport system, permease component I.
 
 0.809
ISM_07850
COG1177 ABC-type spermidine/putrescine transport system, permease component II.
 
 0.806
ISM_04460
Opine/polyamine ABC transporter, permease protein; COG1177 ABC-type spermidine/putrescine transport system, permease component II.
 
 0.805
ISM_03805
COG1176 ABC-type spermidine/putrescine transport system, permease component I.
 
 0.799
Your Current Organism:
Roseovarius nubinhibens
NCBI taxonomy Id: 89187
Other names: R. nubinhibens ISM, Roseobacter sp. ISM, Roseovarius nubinhibens ISM, Roseovarius nubinhibens str. ISM, Roseovarius nubinhibens strain ISM, marine bacterium ISM
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