Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ISM_16550 | ISM_16555 | ISM_16550 | ISM_16555 | COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | Putative oxidoreductase protein; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases). | 0.643 |
| ISM_16550 | ISM_16560 | ISM_16550 | ISM_16560 | COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | Ubiquinone/menaquinone biosynthesis methyltransferase. | 0.799 |
| ISM_16555 | ISM_16550 | ISM_16555 | ISM_16550 | Putative oxidoreductase protein; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases). | COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.643 |
| ISM_16555 | ISM_16560 | ISM_16555 | ISM_16560 | Putative oxidoreductase protein; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases). | Ubiquinone/menaquinone biosynthesis methyltransferase. | 0.803 |
| ISM_16560 | ISM_16550 | ISM_16560 | ISM_16550 | Ubiquinone/menaquinone biosynthesis methyltransferase. | COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.799 |
| ISM_16560 | ISM_16555 | ISM_16560 | ISM_16555 | Ubiquinone/menaquinone biosynthesis methyltransferase. | Putative oxidoreductase protein; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases). | 0.803 |
| ISM_16560 | dddP | ISM_16560 | ISM_05385 | Ubiquinone/menaquinone biosynthesis methyltransferase. | Metallopeptidase, family M24; Able to cleave dimethlysulfonioproprionate (DMSP), releasing dimethyl sulfide (DMS). DMS is the principal form by which sulfur is transported from oceans to the atmosphere. The real activity of the protein is however subject to debate and it is unclear whether it constitutes a real dimethlysulfonioproprionate lyase in vivo: the low activity with DMSP as substrate suggests that DMSP is not its native substrate. | 0.413 |
| dddP | ISM_16560 | ISM_05385 | ISM_16560 | Metallopeptidase, family M24; Able to cleave dimethlysulfonioproprionate (DMSP), releasing dimethyl sulfide (DMS). DMS is the principal form by which sulfur is transported from oceans to the atmosphere. The real activity of the protein is however subject to debate and it is unclear whether it constitutes a real dimethlysulfonioproprionate lyase in vivo: the low activity with DMSP as substrate suggests that DMSP is not its native substrate. | Ubiquinone/menaquinone biosynthesis methyltransferase. | 0.413 |