STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ISM_17075Putative nitrate/nitrite response regulator protein; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. (232 aa)    
Predicted Functional Partners:
ISM_06925
Sensor histidine kinase/response regulator; COG0642 Signal transduction histidine kinase.
  
 0.919
ISM_05910
Sensory box histidine kinase/response regulator; COG0642 Signal transduction histidine kinase.
  
 0.839
ISM_17070
Hypothetical protein.
 
     0.814
ISM_12905
Multi-sensor Signal Transduction Histidine Kinase; COG2202 FOG: PAS/PAC domain.
   
 0.693
ISM_01205
Sensor histidine kinase; COG0591 Na+/proline symporter.
   
 0.681
ISM_04775
Two-component hybrid sensor and regulator; COG0642 Signal transduction histidine kinase.
   
 0.679
ISM_05545
Histidine kinase/response regulator hybrid protein; COG2202 FOG: PAS/PAC domain.
   
 0.679
ISM_00215
Hypothetical protein; COG2199 FOG: GGDEF domain.
  
 
 0.672
ISM_04780
PAS; COG0642 Signal transduction histidine kinase.
   
 0.646
ISM_12885
Two-component hybrid sensor and regulator; COG0642 Signal transduction histidine kinase.
   
 0.646
Your Current Organism:
Roseovarius nubinhibens
NCBI taxonomy Id: 89187
Other names: R. nubinhibens ISM, Roseobacter sp. ISM, Roseovarius nubinhibens ISM, Roseovarius nubinhibens str. ISM, Roseovarius nubinhibens strain ISM, marine bacterium ISM
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