STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A306_00015059Serine/threonine-protein phosphatase 5. (107 aa)    
Predicted Functional Partners:
A306_00015287
Serine/threonine-protein phosphatase 5-like.
 
     0.926
PTGES3
Prostaglandin E synthase 3 (Cytosolic).
    
 0.905
A306_00011916
Alanyl-tRNA editing protein Aarsd1.
    
 0.852
HSP90AB1
Heat shock protein 90kDa alpha (Cytosolic), class B member 1.
   
 0.843
HSP90AA1
Heat shock protein 90kDa alpha (Cytosolic), class A member 1.
   
 0.843
TRAP1
TNF receptor-associated protein 1.
   
 0.796
CDC37L1
Cell division cycle 37-like 1.
    
 
 0.795
TSC1
Tuberous sclerosis 1, transcript variant X1.
   
 0.792
HSP90B1
Heat shock protein 90kDa beta (Grp94), member 1.
    
 0.773
BRAF
B-Raf proto-oncogene, serine/threonine kinase, transcript variant X1.
   
  0.754
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.