STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRXN1Sulfiredoxin 1. (133 aa)    
Predicted Functional Partners:
PRDX1
Peroxiredoxin 1.
   
 0.936
PRDX3
Peroxiredoxin 3.
   
 0.880
PRDX4
Thioredoxin domain-containing protein.
   
 0.880
PRDX6
Peroxiredoxin 6, transcript variant X1.
   
 0.867
FAM45A
Family with sequence similarity 45, member A.
   
 0.861
A306_00009924
Thioredoxin.
   
 
 0.646
GCLM
Glutamate-cysteine ligase, modifier subunit.
   
  
 0.564
GSR
Glutathione reductase.
   
  
 0.562
CAT
Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide.
   
  
 0.541
GCLC
Glutamate-cysteine ligase, catalytic subunit.
   
  
 0.535
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.