STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A306_00015227C-C motif chemokine 21. (115 aa)    
Predicted Functional Partners:
CCR7
Chemokine (C-C motif) receptor 7; Belongs to the G-protein coupled receptor 1 family.
   
 0.987
CXCL12
Chemokine (C-X-C motif) ligand 12; Belongs to the intercrine alpha (chemokine CxC) family.
   
 0.981
ACKR4
Atypical chemokine receptor 4; Belongs to the G-protein coupled receptor 1 family.
   
 0.978
A306_00013346
C-C motif chemokine.
    
 0.969
A306_00013344
C-C motif chemokine 3-like 1.
    
 0.941
A306_00000433
SCY domain-containing protein.
    
 0.939
CXCL14
Chemokine (C-X-C motif) ligand 14.
    
 
 0.937
CXCL8-3
Interleukin-8; Belongs to the intercrine alpha (chemokine CxC) family.
   
 0.852
A306_00002956
Lymphotactin.
   
 0.841
CXCR4
Chemokine (C-X-C motif) receptor 4; Belongs to the G-protein coupled receptor 1 family.
   
 0.796
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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