STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A306_00014715Syntaxin-1B; Belongs to the syntaxin family. (246 aa)    
Predicted Functional Partners:
RIMS2
Regulating synaptic membrane exocytosis 2.
     
 0.935
SNAP25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.872
STXBP1
Syntaxin binding protein 1, transcript variant X2; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.870
NAPB
N-ethylmaleimide-sensitive factor attachment protein, beta, transcript variant X1.
    
 0.800
VAMP3
Vesicle-associated membrane protein 3.
    
 0.795
STXBP3
Syntaxin binding protein 3; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.784
A306_00012569
Vesicle-associated membrane protein 2.
   
 0.763
VAMP1
Vesicle-associated membrane protein 1 (Synaptobrevin 1).
   
 0.763
NSF
N-ethylmaleimide-sensitive factor, transcript variant X1.
   
 0.760
VAMP4
Vesicle-associated membrane protein 4.
    
 0.746
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.