STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BSNBassoon presynaptic cytomatrix protein. (2021 aa)    
Predicted Functional Partners:
CTBP2
C-terminal binding protein 2; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
     
 0.614
CTBP1
C-terminal binding protein 1, transcript variant X1; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
     
 0.614
PCLO
Piccolo presynaptic cytomatrix protein.
  
0.588
NSF
N-ethylmaleimide-sensitive factor, transcript variant X1.
   
  
 0.568
ATG5
Autophagy protein 5; Involved in autophagic vesicle formation.
    
 
 0.557
A306_00010948
C-terminal-binding protein 2; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
     
 0.555
RBBP8
Retinoblastoma binding protein 8.
   
  
 0.498
SNAP25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 
 0.463
SYBU
Syntabulin (Syntaxin-interacting).
     
 0.454
GRIN1
Glutamate receptor, ionotropic, N-methyl D-aspartate 1.
   
 
 0.431
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.