STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MEF2DMyocyte enhancer factor 2D. (336 aa)    
Predicted Functional Partners:
MEF2B
Myocyte enhancer factor 2B.
 
  
 0.972
MYOD1
Myogenic factor.
    
 0.849
MYOG
Myogenin (Myogenic factor 4).
    
 0.794
MYF5
Myogenic factor.
    
 0.755
MYF6
Myogenic factor 6 (Herculin).
    
 0.743
MAPK12
Mitogen-activated protein kinase.
    
 0.715
SRF
Serum response factor isoform X2.
     
 0.673
NKX2-5
NK2 homeobox 5.
    
 
 0.630
MEF2C
Myocyte enhancer factor 2C, transcript variant X8.
   
0.575
MEF2A
Myocyte enhancer factor 2A, transcript variant X1.
   
0.575
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.