STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TAF11TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa. (181 aa)    
Predicted Functional Partners:
TAF6
TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa.
    
 0.998
TAF8
TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa.
    
 0.998
TAF12
Transcription initiation factor TFIID subunit 12 isoform X1.
    
 0.998
TAF9B
Transcription initiation factor TFIID subunit 9B.
   
 0.998
TAF1
Transcription initiation factor TFIID subunit.
    
 0.998
TAF13
TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 18kDa.
    
 0.998
TAF2
Transcription initiation factor TFIID subunit 2 isoform X1.
    
 0.998
TAF3
TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140kDa.
   
 0.997
TAF7L
TAF7-like RNA polymerase II, TATA box binding protein (TBP)-associated factor, 50kDa.
    
 0.993
TAF4B
TAF4b RNA polymerase II, TATA box binding protein (TBP)-associated factor, 105kDa.
    
 0.986
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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