STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A306_00014207Ig heavy chain Mem5. (300 aa)    
Predicted Functional Partners:
A306_00000409
Uncharacterized protein.
   
 0.984
A306_00014332
Putative LOC102084667.
   
 0.856
CD5
CD5 molecule.
    
 
 0.820
TFPI
Tissue factor pathway inhibitor isoform X1.
    
  0.813
CD81
Tetraspanin.
    
  0.810
PLAT
Plasminogen activator; Belongs to the peptidase S1 family.
    
  0.795
PLAU
Plasminogen activator, urokinase.
    
  0.795
MAPT
Microtubule-associated protein.
    
   0.790
MAP2
Microtubule-associated protein.
    
   0.790
MCL1
Myeloid cell leukemia 1.
    
   0.758
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.