STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CNOT9Uncharacterized protein. (301 aa)    
Predicted Functional Partners:
CNOT1
CCR4-NOT transcription complex, subunit 1.
    
 0.998
CNOT4
CCR4-NOT transcription complex, subunit 4, transcript variant X1.
    
 0.998
CNOT2
CCR4-NOT transcription complex, subunit 2, transcript variant X1.
   
 0.995
CNOT8
CCR4-NOT transcription complex, subunit 8, transcript variant X1.
   
 0.979
CNOT7
CCR4-NOT transcription complex, subunit 7.
   
 0.979
CNOT11
CCR4-NOT transcription complex, subunit 11.
    
 0.970
CNOT10
CCR4-NOT transcription complex, subunit 10.
    
 0.950
SKIV2L2
Uncharacterized protein.
   
 
 0.933
A306_00000208
Endo/exonuclease/phosphatase domain-containing protein.
    
 0.894
CNOT6
CCR4-NOT transcription complex, subunit 6, transcript variant X1.
    
 0.894
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.