STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TACR1Tachykinin receptor 1; Belongs to the G-protein coupled receptor 1 family. (411 aa)    
Predicted Functional Partners:
TAC1
Tachykinin, 1.
    
 0.984
GNA11
Guanine nucleotide-binding protein subunit alpha-11.
    
 0.768
A306_00007955
Guanine nucleotide-binding protein G(Q) subunit alpha.
    
 0.768
A306_00007954
Guanine nucleotide-binding protein subunit alpha-14.
    
 0.768
SDHAF3
Succinate dehydrogenase complex assembly factor 3.
    
 0.647
GNB1
Guanine nucleotide binding protein (G protein), beta polypeptide 1.
    
 0.426
GNB4
Guanine nucleotide binding protein (G protein), beta polypeptide 4.
    
 0.426
GNG12
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
    
  0.416
CLTA
Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.
     
 0.414
GNB3
Guanine nucleotide binding protein (G protein), beta polypeptide 3.
    
 0.409
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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