STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A306_00013934Proproteinase E; Belongs to the peptidase S1 family. (220 aa)    
Predicted Functional Partners:
MET
MET proto-oncogene, receptor tyrosine kinase.
    
 0.646
A306_00000410
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
  
 
  0.599
A306_00015307
Acrosin; Belongs to the peptidase S1 family.
  
 
  0.586
A306_00011520
Granzyme E.
  
 
  0.573
TMPRSS13
Uncharacterized protein; Belongs to the peptidase S1 family.
  
 
  0.520
ALB
Albumin.
   
 
 0.476
A306_00011324
Carboxypeptidase A1.
   
 
 0.454
A306_00011326
Carboxypeptidase A2.
   
 
 0.454
A306_00011325
Carboxypeptidase A1.
   
 
 0.454
WDR90
WD repeat domain 90.
    
 0.432
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.