STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBPMSRNA binding protein with multiple splicing. (218 aa)    
Predicted Functional Partners:
QKI
QKI, KH domain containing, RNA binding, transcript variant X1.
    
 
 0.804
RBFOX2
RNA binding protein fox-1 homolog; RNA-binding protein that regulates alternative splicing events.
   
 
 0.678
RBPMS2
RNA binding protein with multiple splicing 2.
  
  
0.542
ESRP1
Epithelial splicing regulatory protein 1.
    
 
 0.528
DIP2C
Disco-interacting protein 2 homolog C, transcript variant X2.
      
 0.522
RBFOX1
RNA binding protein fox-1 homolog; RNA-binding protein that regulates alternative splicing events.
   
 
 0.520
RBM38
RNA binding motif protein 38, transcript variant X1.
    
 
 0.481
IK
IK cytokine, down-regulator of HLA II.
      
 0.471
SMU1
Uncharacterized protein.
      
 0.471
ESRP2
Epithelial splicing regulatory protein 2, transcript variant X1.
    
 
 0.470
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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