STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC9A5Sodium/hydrogen exchanger; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family. (843 aa)    
Predicted Functional Partners:
CHP1
Calcineurin-like EF-hand protein 1.
   
 0.775
RSPH3
Uncharacterized protein.
     
 0.587
CEP83
Centrosomal protein 83kDa.
     
 0.582
SCNN1G
Sodium channel, non voltage gated 1 gamma subunit; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family.
      
 0.552
PPP3R1
Protein phosphatase 3, regulatory subunit B, alpha.
   
 0.540
TESC
Tescalcin.
   
 0.538
ALDH18A1
Aldehyde dehydrogenase 18 family, member A1.
     
 0.475
ERCC3
Excision repair cross-complementation group 3.
     
 0.434
PLXNC1
Plexin C1, transcript variant X1.
      
 0.429
PSMD6
Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 6.
      
 0.427
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.