STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COL9A2Collagen, type IX, alpha 2. (641 aa)    
Predicted Functional Partners:
ITGB1
Integrin beta.
    
 0.913
CD44
CD44 molecule (Indian blood group), transcript variant X1.
    
 0.901
ITGA1
Integrin, alpha 1; Belongs to the integrin alpha chain family.
     
 0.725
ITGA3
Integrin, alpha 3 (Antigen CD49C, alpha 3 subunit of VLA-3 receptor).
    
 0.701
ITGB3
Integrin beta; Belongs to the integrin beta chain family.
    
 0.701
ITGAV
Integrin, alpha V; Belongs to the integrin alpha chain family.
    
 0.701
ITGA6
Integrin, alpha 6; Belongs to the integrin alpha chain family.
    
 0.698
ITGB5
Integrin beta.
    
 0.697
ITGB4
Integrin beta.
    
 0.696
ITGB6
Integrin beta; Belongs to the integrin beta chain family.
   
 0.696
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.