STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CENPTCentromere protein T. (633 aa)    
Predicted Functional Partners:
CENPW
Centromere protein W.
   
 
 0.773
VGLL4
Vestigial-like family member 4, transcript variant X1.
    
 
 0.715
VGLL1
Vestigial-like family member 1.
    
 
 0.546
FAM181A
Family with sequence similarity 181, member A.
    
   0.439
SLC25A42
Solute carrier family 25, member 42; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 
 0.428
DUT
Deoxyuridine triphosphatase.
   
 
 0.428
BAG3
BCL2-associated athanogene 3.
    
 0.415
GAS7
Growth arrest-specific 7.
    
 0.414
A306_00014642
Growth arrest-specific protein 7.
    
 0.414
A306_00014300
E3 ubiquitin-protein ligase NEDD4-like.
    
 0.414
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
Server load: low (28%) [HD]