STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A306_00011520Granzyme E. (237 aa)    
Predicted Functional Partners:
MET
MET proto-oncogene, receptor tyrosine kinase.
    
 0.644
A306_00009628
Chymotrypsinogen B; Belongs to the peptidase S1 family.
  
0.591
A306_00013934
Proproteinase E; Belongs to the peptidase S1 family.
  
 
  0.573
F10
Coagulation factor X; Belongs to the peptidase S1 family.
  
 0.563
A306_00000453
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
  
  
  0.561
A306_00000410
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
  
  
  0.556
A306_00015345
Trypsin.
  
  
  0.555
TMPRSS12
Transmembrane (C-terminal) protease, serine 12; Belongs to the peptidase S1 family.
  
  
  0.555
A306_00000443
Peptidase S1 domain-containing protein.
  
  
  0.553
A306_00015307
Acrosin; Belongs to the peptidase S1 family.
  
  
  0.551
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.