STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THY1Thy-1 cell surface antigen. (161 aa)    
Predicted Functional Partners:
CD4
CD4 molecule.
   
  
 0.647
PSEN1
Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family.
      
 0.556
ENG
Endoglin.
      
 0.551
CD34
CD34 molecule, transcript variant X1.
      
 0.546
PTPRC
Protein tyrosine phosphatase, receptor type, C, transcript variant X1.
      
 0.541
CD44
CD44 molecule (Indian blood group), transcript variant X1.
      
 0.541
NT5E
5'-nucleotidase, ecto (CD73); Belongs to the 5'-nucleotidase family.
      
 0.541
PECAM1
Platelet/endothelial cell adhesion molecule 1, transcript variant X1.
      
 0.521
BDNF
Brain-derived neurotrophic factor; Promotes the survival of neuronal populations that are all located either in the central nervous system or directly connected to it; Belongs to the NGF-beta family.
      
 0.520
A306_00000250
Uncharacterized protein.
      
 0.502
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.