STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POU2F3POU domain protein. (532 aa)    
Predicted Functional Partners:
SP1
Sp1 transcription factor.
    
 0.658
POU2AF1
POU class 2 associating factor 1.
    
 
 0.637
SNAPC4
Small nuclear RNA activating complex, polypeptide 4, 190kDa.
    
  0.631
PLA1A
Phospholipase A1 member A, transcript variant X1.
    
 0.595
GTF2B
General transcription factor IIB.
    
 0.586
SNAPC3
Small nuclear RNA activating complex, polypeptide 3, 50kDa, transcript variant X1.
   
 
  0.581
SNAPC1
Small nuclear RNA activating complex, polypeptide 1, 43kDa.
     
 0.579
GTF2A1
General transcription factor IIA, 1, 19/37kDa.
   
 
  0.577
PCF11
PCF11 cleavage and polyadenylation factor subunit.
     
 0.563
GTF2F1
Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.
     
 0.559
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.