Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A306_00014300 | NEDD4L | A0A2I0LL16 | A0A2I0LRY7 | E3 ubiquitin-protein ligase NEDD4-like. | Neural cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase. | 0.900 |
A306_00014300 | RPS27A | A0A2I0LL16 | A0A2I0M9A1 | E3 ubiquitin-protein ligase NEDD4-like. | Ribosomal protein S27a. | 0.595 |
DLG3 | NEDD4 | A0A2I0M4R0 | A0A2I0M714 | Uncharacterized protein; Belongs to the MAGUK family. | E3 ubiquitin-protein ligase NEDD4 isoform X2. | 0.909 |
DLG3 | NEDD4L | A0A2I0M4R0 | A0A2I0LRY7 | Uncharacterized protein; Belongs to the MAGUK family. | Neural cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase. | 0.909 |
EGFR | NEDD4 | A0A2I0M4T2 | A0A2I0M714 | Receptor protein-tyrosine kinase. | E3 ubiquitin-protein ligase NEDD4 isoform X2. | 0.797 |
EGFR | NEDD4L | A0A2I0M4T2 | A0A2I0LRY7 | Receptor protein-tyrosine kinase. | Neural cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase. | 0.797 |
EGFR | RPS27A | A0A2I0M4T2 | A0A2I0M9A1 | Receptor protein-tyrosine kinase. | Ribosomal protein S27a. | 0.459 |
IGF1R | NEDD4 | A0A2I0MD56 | A0A2I0M714 | Tyrosine-protein kinase receptor. | E3 ubiquitin-protein ligase NEDD4 isoform X2. | 0.723 |
IGF1R | NEDD4L | A0A2I0MD56 | A0A2I0LRY7 | Tyrosine-protein kinase receptor. | Neural cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase. | 0.723 |
IGF1R | SMAD7 | A0A2I0MD56 | A0A2I0M0K8 | Tyrosine-protein kinase receptor. | Mothers against decapentaplegic homolog. | 0.404 |
NEDD4 | DLG3 | A0A2I0M714 | A0A2I0M4R0 | E3 ubiquitin-protein ligase NEDD4 isoform X2. | Uncharacterized protein; Belongs to the MAGUK family. | 0.909 |
NEDD4 | EGFR | A0A2I0M714 | A0A2I0M4T2 | E3 ubiquitin-protein ligase NEDD4 isoform X2. | Receptor protein-tyrosine kinase. | 0.797 |
NEDD4 | IGF1R | A0A2I0M714 | A0A2I0MD56 | E3 ubiquitin-protein ligase NEDD4 isoform X2. | Tyrosine-protein kinase receptor. | 0.723 |
NEDD4 | NEDD4L | A0A2I0M714 | A0A2I0LRY7 | E3 ubiquitin-protein ligase NEDD4 isoform X2. | Neural cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase. | 0.900 |
NEDD4 | RPS27A | A0A2I0M714 | A0A2I0M9A1 | E3 ubiquitin-protein ligase NEDD4 isoform X2. | Ribosomal protein S27a. | 0.792 |
NEDD4 | SCNN1B | A0A2I0M714 | A0A2I0LX33 | E3 ubiquitin-protein ligase NEDD4 isoform X2. | Sodium channel, non voltage gated 1 beta subunit; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family. | 0.823 |
NEDD4 | SCNN1G | A0A2I0M714 | A0A2I0LX17 | E3 ubiquitin-protein ligase NEDD4 isoform X2. | Sodium channel, non voltage gated 1 gamma subunit; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family. | 0.702 |
NEDD4 | SMAD2 | A0A2I0M714 | A0A2I0M0M7 | E3 ubiquitin-protein ligase NEDD4 isoform X2. | Mothers against decapentaplegic homolog. | 0.701 |
NEDD4 | SMAD7 | A0A2I0M714 | A0A2I0M0K8 | E3 ubiquitin-protein ligase NEDD4 isoform X2. | Mothers against decapentaplegic homolog. | 0.811 |
NEDD4L | A306_00014300 | A0A2I0LRY7 | A0A2I0LL16 | Neural cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase. | E3 ubiquitin-protein ligase NEDD4-like. | 0.900 |
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