STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPB41Erythrocyte membrane protein band 4.1. (509 aa)    
Predicted Functional Partners:
FARP2
FERM, RhoGEF and pleckstrin domain protein 2.
 
    
 0.903
CASK
Calcium/calmodulin-dependent serine protein kinase (MAGUK family), transcript variant X1; Belongs to the MAGUK family.
   
 0.783
MPP1
Membrane protein, palmitoylated 1, 55kDa; Belongs to the MAGUK family.
 
 
 0.730
A306_00000498
Ig-like domain-containing protein.
    
 
 0.699
A306_00000216
HP domain-containing protein.
   
  
 0.672
ADD1
Adducin 1 (Alpha), transcript variant X1.
      
 0.660
ADD2
Adducin 2 (Beta).
      
 0.659
ADD3
Adducin 3 (Gamma), transcript variant X1.
      
 0.659
EZR
Ezrin, transcript variant X1.
     
0.594
RDX
Radixin.
     
0.579
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.