STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PELI1Pellino E3 ubiquitin protein ligase 1. (454 aa)    
Predicted Functional Partners:
UBE2V1
Ubiquitin-conjugating enzyme E2 variant 1.
    
 0.941
IRAK4
Interleukin-1 receptor-associated kinase 4.
    
 0.921
IRAK2
Interleukin-1 receptor-associated kinase 2.
    
 0.872
TRAF6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 0.868
RIPK1
Receptor (TNFRSF)-interacting serine-threonine kinase 1.
    
 0.785
UBE2N
Ubiquitin-conjugating enzyme E2N; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.731
TRADD
TNFRSF1A-associated via death domain.
      
 0.555
UBE2V2
Ubiquitin-conjugating enzyme E2 variant 2.
    
 0.522
MYD88
Myeloid differentiation primary response 88.
    
 
 0.508
TOLLIP
Toll interacting protein.
      
 0.485
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.