STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRSF7Serine/arginine-rich splicing factor 7. (299 aa)    
Predicted Functional Partners:
SRPK1
SRSF protein kinase 1; Belongs to the protein kinase superfamily.
    
 0.916
SRSF3
Serine/arginine-rich splicing factor 3, transcript variant X1.
   
0.912
TRA2B
RRM domain-containing protein.
   
 0.883
SRSF2
Serine/arginine-rich splicing factor 2.
   
 0.877
TRA2A
RRM domain-containing protein.
   
 0.759
SNRNP35
Small nuclear ribonucleoprotein 35kDa (U11/U12).
   
 0.722
SLU7
SLU7 homolog, splicing factor, transcript variant X1.
    
 0.705
PABPN1L
Poly(A) binding protein, nuclear 1-like (Cytoplasmic).
   
 0.696
EIF4A3
Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family.
   
 0.696
ZRSR2
Zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2.
   
 0.693
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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