STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SENP2SUMO1/sentrin/SMT3 specific peptidase 2. (597 aa)    
Predicted Functional Partners:
A306_00015089
Nuclear pore complex protein Nup153-like.
   
 0.926
NUP153
Nucleoporin 153kDa.
   
 0.926
DVL1
Dishevelled segment polarity protein 1.
    
  0.900
SUMO1
Small ubiquitin-related modifier.
   
 0.853
A306_00010235
Small ubiquitin-related modifier 3.
   
 0.849
SUMO2
Small ubiquitin-related modifier.
   
 0.849
IPO5
Importin 5.
    
 
 0.756
RANGAP1
Ran GTPase activating protein 1.
    
 
 0.726
TEX10
Testis expressed 10.
    
 0.694
WDR18
WD repeat domain 18.
    
 0.688
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.