STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KERAKeratocan. (352 aa)    
Predicted Functional Partners:
OGN
Osteoglycin.
 
 
 
0.726
LUM
Lumican.
  
 
0.699
LRR1
Leucine rich repeat protein 1.
  
   
 0.674
A306_00015034
Latrophilin-1-like; Belongs to the G-protein coupled receptor 2 family.
    
   0.673
ADGRL3
Adhesion G protein-coupled receptor L3; Belongs to the G-protein coupled receptor 2 family.
    
   0.673
ADGRL2
Adhesion G protein-coupled receptor L2, transcript variant X1; Belongs to the G-protein coupled receptor 2 family.
    
   0.673
FMOD
Fibromodulin.
  
  
 
0.622
ASPN
Asporin.
  
 
0.620
OMD
Osteomodulin.
  
 
0.582
PRELP
Proline/arginine-rich end leucine-rich repeat protein.
  
  
 
0.570
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.