STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACSM3Acyl-CoA synthetase medium-chain family member 3, transcript variant X1. (579 aa)    
Predicted Functional Partners:
A306_00008415
Acyl-coenzyme A synthetase ACSM4, mitochondrial.
  
  
 
0.904
A306_00008414
Acyl-coenzyme A synthetase ACSM4, mitochondrial, transcript variant X1.
  
  
 
0.901
CS
Citrate synthase; Belongs to the citrate synthase family.
  
 0.758
HSDL2
Hydroxysteroid dehydrogenase like 2.
  
 
 0.725
AASDH
Aminoadipate-semialdehyde dehydrogenase.
      
 0.621
ADHFE1
Alcohol dehydrogenase, iron containing, 1.
  
 
 0.555
ACSF2
Acyl-CoA synthetase family member 2.
 
0.542
HADHB
LOW QUALITY PROTEIN: trifunctional enzyme subunit beta, mitochondrial; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.536
ACADL
Acyl-CoA dehydrogenase, long chain.
  
 
 0.527
SORD
Sorbitol dehydrogenase.
   
 
 0.525
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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