STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NET1Neuroepithelial cell transforming 1. (537 aa)    
Predicted Functional Partners:
RHOA
Ras homolog family member A.
    
 0.656
RHOC
Ras homolog family member C.
    
 0.656
RHOB
Ras homolog family member B.
    
 0.656
ITSN2
Intersectin 2.
    
0.632
RND3
Rho family GTPase 3.
    
 0.599
RHOF
Ras homolog family member F (In filopodia).
    
 0.591
RHOD
Ras homolog family member D.
    
 0.591
SCAMP2
Secretory carrier-associated membrane protein.
    
 
 0.526
A306_00014930
Proline-, glutamic acid-and leucine-rich protein 1-like.
    
 0.507
WASL
Wiskott-Aldrich syndrome-like, transcript variant X1.
    
 0.507
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.