STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM171Transmembrane protein 171. (333 aa)    
Predicted Functional Partners:
MANSC1
MANSC domain containing 1.
      
 0.651
FAM134C
Family with sequence similarity 134, member C.
      
 0.571
TMEM221
Transmembrane protein 221.
      
 0.545
GPR137C
G protein-coupled receptor 137C.
      
 0.539
A306_00011367
Putative G-protein coupled receptor 141.
      
 0.524
ZNF366
Zinc finger protein 366.
      
 0.523
FAM189A2
Family with sequence similarity 189, member A2.
      
 0.521
TMEM206
Transmembrane protein 206, transcript variant X1.
      
 0.520
ZNF644
Zinc finger protein 644.
  
     0.495
ZNF292
Zinc finger protein 292.
  
     0.480
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.