STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SH3D19SH3 domain containing 19. (993 aa)    
Predicted Functional Partners:
CLINT1
Clathrin interactor 1.
     
 0.664
SH3YL1
SH3 and SYLF domain containing 1.
   
  
0.608
GCH1
GTP cyclohydrolase 1.
    
   0.591
VTA1
Vesicle (Multivesicular body) trafficking 1, transcript variant X2.
    
   0.591
GAK
Cyclin G associated kinase.
     
 0.564
UBASH3B
Ubiquitin associated and SH3 domain containing B.
      
 0.489
FTH1
Ferritin; Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation.
   
 
 0.469
NOXO1
NADPH oxidase organizer 1.
   
 0.450
SH3PXD2B
SH3 and PX domains 2B.
   
 0.439
NCF1
Neutrophil cytosolic factor 1.
   
0.439
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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