STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYO19Myosin XIX; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (972 aa)    
Predicted Functional Partners:
RHOT2
Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.
    
 0.685
RHOT1
Ras homolog family member T1, transcript variant X3.
    
 0.685
LRGUK
Leucine-rich repeats and guanylate kinase domain containing.
    
 
 0.551
MYO9A
Myosin IXA.
 
  
 0.544
DHRS11
Dehydrogenase/reductase (SDR family) member 11; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 0.533
TOMM20
Uncharacterized protein.
   
  
 0.530
TRAK2
Trafficking protein, kinesin binding 2.
      
 0.519
MRM1
Mitochondrial rRNA methyltransferase 1.
    
 
 0.519
PIGW
Phosphatidylinositol-glycan biosynthesis class W protein; Probable acetyltransferase, which acetylates the inositol ring of phosphatidylinositol during biosynthesis of GPI-anchor.
      
 0.493
CHN1
Chimerin 1.
 
  
 0.481
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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