STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRRM4Serine/arginine repetitive matrix 4. (593 aa)    
Predicted Functional Partners:
SLC17A6
Solute carrier family 17 (Vesicular glutamate transporter), member 6.
   
  
 0.640
WFS1
Wolfram syndrome 1 (Wolframin).
      
 0.622
MYO6
Myosin VI, transcript variant X1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 
 0.575
NRSN1
Neurensin 1.
   
  
 0.572
SLC26A5
Solute carrier family 26 (Anion exchanger), member 5.
      
 0.553
SLC52A3
Uncharacterized protein.
      
 0.551
MEX3B
Mex-3 RNA binding family member B.
    
 0.549
PTBP2
Polypyrimidine tract binding protein 2.
      
 0.541
TMC3
Transmembrane channel-like protein.
    
 0.505
TMC1
Transmembrane channel-like protein.
    
 0.505
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.