STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCAS2Breast carcinoma amplified sequence 2. (161 aa)    
Predicted Functional Partners:
PRPF19
Uncharacterized protein.
   
 0.998
PLRG1
Pleiotropic regulator 1.
   
 0.998
CWC15
CWC15 spliceosome-associated protein.
   
 0.989
CDC40
Cell division cycle 40.
   
 
 0.989
PRPF8
Pre-mRNA processing factor 8.
    
 
 0.985
EFTUD2
116 kDa U5 small nuclear ribonucleoprotein component.
   
 
 0.980
SF3B4
Splicing factor 3b, subunit 4, 49kDa.
   
   0.977
SNRNP40
Small nuclear ribonucleoprotein 40kDa (U5).
   
 
 0.975
A306_00015272
Cell division cycle 5-like protein.
   
 0.960
CDC5L
Cell division cycle 5-like.
   
 0.960
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.