STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBM15RNA binding motif protein 15. (511 aa)    
Predicted Functional Partners:
ZC3H13
Zinc finger CCCH-type containing 13.
   
 
 0.660
WTAP
Wilms tumor 1 associated protein, transcript variant X1.
    
 
 0.613
METTL14
Methyltransferase like 14; Belongs to the MT-A70-like family.
    
 
 0.608
VIRMA
KIAA1429 ortholog.
    
 
 0.538
BARX2
BARX homeobox 2.
      
 0.487
METTL16
Methyltransferase like 16.
      
 0.468
YTHDF1
YTH N(6)-methyladenosine RNA binding protein 1, transcript variant X1.
   
  
 0.460
YTHDC2
YTH domain containing 2, transcript variant X1.
    
 
 0.452
CBLL1
Cbl proto-oncogene-like 1, E3 ubiquitin protein ligase.
      
 0.451
ALKBH5
AlkB homolog 5, RNA demethylase.
      
 0.427
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.