STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MRM2FtsJ domain-containing protein. (253 aa)    
Predicted Functional Partners:
A306_00009006
WD repeat-containing protein 6.
   
 
 0.918
NOP58
NOP58 ribonucleoprotein.
  
 0.908
PES1
Pescadillo ribosomal biogenesis factor 1.
   
   0.895
GTPBP4
GTP binding protein 4.
   
 
 0.886
EBNA1BP2
EBNA1 binding protein 2.
   
 
 0.882
RSL24D1
Ribosomal L24 domain containing 1.
   
 
 0.882
NOC2L
NOC2-like nucleolar associated transcriptional repressor.
   
 
 0.879
NSA2
NSA2 ribosome biogenesis homolog.
  
 
 0.877
FAM96B
Family with sequence similarity 96, member B.
 
      0.876
NIFK
Nucleolar protein interacting with the FHA domain of MKI67.
   
 
 0.852
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.