STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRRAPTransformation/transcription domain-associated protein; Belongs to the PI3/PI4-kinase family. (3243 aa)    
Predicted Functional Partners:
TAF9B
Transcription initiation factor TFIID subunit 9B.
    
 0.997
TAF12
Transcription initiation factor TFIID subunit 12 isoform X1.
    
 0.995
SUPT3H
Uncharacterized protein.
    
 0.994
SUPT20H
Uncharacterized protein.
    
 0.991
TADA3
Transcriptional adaptor 3.
    
 0.990
RUVBL1
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
    
 0.985
TADA1
Transcriptional adaptor 1.
   
 
 0.985
USP22
Ubiquitin carboxyl-terminal hydrolase.
    
 0.984
DMAP1
DNA methyltransferase 1 associated protein 1.
    
 0.983
TADA2A
Transcriptional adaptor 2A.
    
 0.982
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.