STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPGRIP1LRPGRIP1-like. (1275 aa)    
Predicted Functional Partners:
A306_00000056
Uncharacterized protein.
    
 0.956
NPHP1
Nephronophthisis 1 (Juvenile).
    
 0.906
RPGR
Retinitis pigmentosa GTPase regulator.
    
 
 0.747
CC2D2A
Coiled-coil and C2 domain containing 2A.
   
  
 0.697
CEP290
Centrosomal protein 290kDa.
   
 
 0.692
TMEM67
Transmembrane protein 67.
   
  
 0.678
TBXA2R
Thromboxane A2 receptor.
    
 
 0.659
TMEM231
Transmembrane protein 231.
      
 0.644
AHI1
Abelson helper integration site 1.
    
 0.644
USH2A
Usher syndrome 2A (Autosomal recessive, mild).
     
 0.634
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.