Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A306_00001516 | DBF4 | A0A2I0MXD3 | A0A2I0MRC2 | DNA replication licensing factor mcm4; Belongs to the MCM family. | DBF4 zinc finger. | 0.996 |
A306_00001516 | MCM2 | A0A2I0MXD3 | A0A2I0LVL9 | DNA replication licensing factor mcm4; Belongs to the MCM family. | DNA helicase; Belongs to the MCM family. | 0.999 |
A306_00001516 | MCM5 | A0A2I0MXD3 | A0A2I0MKP3 | DNA replication licensing factor mcm4; Belongs to the MCM family. | DNA helicase; Belongs to the MCM family. | 0.999 |
A306_00001516 | MCM6 | A0A2I0MXD3 | A0A2I0MGE6 | DNA replication licensing factor mcm4; Belongs to the MCM family. | DNA helicase; Belongs to the MCM family. | 0.999 |
A306_00001516 | ORC1 | A0A2I0MXD3 | A0A2I0MCG4 | DNA replication licensing factor mcm4; Belongs to the MCM family. | Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. | 0.998 |
A306_00001516 | ORC2 | A0A2I0MXD3 | R7VU51 | DNA replication licensing factor mcm4; Belongs to the MCM family. | Origin recognition complex, subunit 2. | 0.995 |
A306_00001516 | ORC3 | A0A2I0MXD3 | A0A2I0MV33 | DNA replication licensing factor mcm4; Belongs to the MCM family. | Origin recognition complex, subunit 3. | 0.992 |
A306_00001516 | ORC4 | A0A2I0MXD3 | A0A2I0MG47 | DNA replication licensing factor mcm4; Belongs to the MCM family. | Origin recognition complex subunit 4; Component of the origin recognition complex (ORC) that binds origins of replication; Belongs to the ORC4 family. | 0.994 |
A306_00001516 | ORC5 | A0A2I0MXD3 | A0A2I0MH71 | DNA replication licensing factor mcm4; Belongs to the MCM family. | Origin recognition complex, subunit 5. | 0.993 |
A306_00001516 | ORC6 | A0A2I0MXD3 | A0A2I0M2I3 | DNA replication licensing factor mcm4; Belongs to the MCM family. | Origin recognition complex, subunit 6. | 0.979 |
DBF4 | A306_00001516 | A0A2I0MRC2 | A0A2I0MXD3 | DBF4 zinc finger. | DNA replication licensing factor mcm4; Belongs to the MCM family. | 0.996 |
DBF4 | MCM2 | A0A2I0MRC2 | A0A2I0LVL9 | DBF4 zinc finger. | DNA helicase; Belongs to the MCM family. | 0.990 |
DBF4 | MCM5 | A0A2I0MRC2 | A0A2I0MKP3 | DBF4 zinc finger. | DNA helicase; Belongs to the MCM family. | 0.992 |
DBF4 | MCM6 | A0A2I0MRC2 | A0A2I0MGE6 | DBF4 zinc finger. | DNA helicase; Belongs to the MCM family. | 0.988 |
DBF4 | ORC1 | A0A2I0MRC2 | A0A2I0MCG4 | DBF4 zinc finger. | Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. | 0.757 |
DBF4 | ORC2 | A0A2I0MRC2 | R7VU51 | DBF4 zinc finger. | Origin recognition complex, subunit 2. | 0.980 |
DBF4 | ORC3 | A0A2I0MRC2 | A0A2I0MV33 | DBF4 zinc finger. | Origin recognition complex, subunit 3. | 0.779 |
DBF4 | ORC4 | A0A2I0MRC2 | A0A2I0MG47 | DBF4 zinc finger. | Origin recognition complex subunit 4; Component of the origin recognition complex (ORC) that binds origins of replication; Belongs to the ORC4 family. | 0.976 |
DBF4 | ORC5 | A0A2I0MRC2 | A0A2I0MH71 | DBF4 zinc finger. | Origin recognition complex, subunit 5. | 0.797 |
DBF4 | ORC6 | A0A2I0MRC2 | A0A2I0M2I3 | DBF4 zinc finger. | Origin recognition complex, subunit 6. | 0.976 |
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