STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CFAP74Cilia and flagella associated protein 74. (890 aa)    
Predicted Functional Partners:
LRGUK
Leucine-rich repeats and guanylate kinase domain containing.
    
 
 0.822
CFAP221
Cilia and flagella associated protein 221.
   
 
 0.624
TSNAXIP1
Translin-associated factor X interacting protein 1.
    
 
 0.581
SPAG17
Sperm associated antigen 17.
    
 
 0.572
MYCBP
MYC binding protein.
    
 
 0.550
A306_00000118
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.538
CFAP69
Cilia and flagella associated protein 69.
    
   0.538
DPY30
Dpy-30 histone methyltransferase complex regulatory subunit.
    
   0.538
CCDC146
Coiled-coil domain containing 146.
      
 0.522
RSPH14
Uncharacterized protein.
      
 0.520
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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