STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUNH16orf62Uncharacterized protein. (984 aa)    
Predicted Functional Partners:
VPS29
Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.
    
 
 0.854
CCDC93
Coiled-coil domain containing 93.
    
 
 0.831
COMMD1
Copper metabolism (Murr1) domain containing 1.
    
 
 0.818
COMMD6
COMM domain containing 6, transcript variant X2.
    
 
 0.802
COMMD2
COMM domain containing 2.
    
 
 0.764
DSCR3
Down syndrome critical region 3.
   
 
 0.754
COMMD4
COMM domain containing 4.
    
 
 0.699
CCP110
Centriolar coiled coil protein 110kDa, transcript variant X1.
 
      0.682
FAM45A
Family with sequence similarity 45, member A.
    
 
 0.619
COMMD10
COMM domain containing 10.
    
 
 0.572
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.