STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YPEL5Protein yippee-like; Belongs to the yippee family. (121 aa)    
Predicted Functional Partners:
RMND5A
Required for meiotic nuclear division 5 homolog A, transcript variant X1.
    
 
 0.813
WDR26
WD repeat domain 26, transcript variant X1.
   
 
 0.787
ARMC8
Armadillo repeat containing 8, transcript variant X1.
    
 0.682
RANBP10
RAN binding protein 10.
   
 
 0.642
RANBP9
RAN binding protein 9.
   
 
 0.642
FAM162B
Family with sequence similarity 162, member B.
      
 0.634
GID8
GID complex subunit 8.
    
 
 0.557
USP32
Ubiquitin specific peptidase 32; Belongs to the peptidase C19 family.
   
  
 0.556
TMEM167A
Transmembrane protein 167A.
      
 0.543
MAEA
Macrophage erythroblast attacher, transcript variant X1.
   
 
 0.526
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.