Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CASK | SDC2 | A0A2I0M5M4 | A0A2I0MXT0 | Calcium/calmodulin-dependent serine protein kinase (MAGUK family), transcript variant X1; Belongs to the MAGUK family. | Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. | 0.719 |
CASK | SDCBP2 | A0A2I0M5M4 | A0A2I0M5V7 | Calcium/calmodulin-dependent serine protein kinase (MAGUK family), transcript variant X1; Belongs to the MAGUK family. | Syndecan binding protein (Syntenin) 2. | 0.565 |
EFNB1 | EFNB2 | A0A2I0LRL1 | A0A2I0MSC7 | Ephrin-B1; Belongs to the ephrin family. | Ephrin-B2; Belongs to the ephrin family. | 0.616 |
EFNB1 | SDCBP2 | A0A2I0LRL1 | A0A2I0M5V7 | Ephrin-B1; Belongs to the ephrin family. | Syndecan binding protein (Syntenin) 2. | 0.499 |
EFNB2 | EFNB1 | A0A2I0MSC7 | A0A2I0LRL1 | Ephrin-B2; Belongs to the ephrin family. | Ephrin-B1; Belongs to the ephrin family. | 0.616 |
EFNB2 | SDCBP2 | A0A2I0MSC7 | A0A2I0M5V7 | Ephrin-B2; Belongs to the ephrin family. | Syndecan binding protein (Syntenin) 2. | 0.502 |
IFT172 | IFT57 | A0A2I0LL09 | A0A2I0MSW7 | Intraflagellar transport 172. | Intraflagellar transport 57. | 0.988 |
IFT172 | IFT80 | A0A2I0LL09 | A0A2I0M1C0 | Intraflagellar transport 172. | Intraflagellar transport 80. | 0.982 |
IFT172 | SDCBP2 | A0A2I0LL09 | A0A2I0M5V7 | Intraflagellar transport 172. | Syndecan binding protein (Syntenin) 2. | 0.518 |
IFT172 | TRAF3IP1 | A0A2I0LL09 | A0A2I0MIF1 | Intraflagellar transport 172. | TNF receptor-associated factor 3 interacting protein 1. | 0.975 |
IFT57 | IFT172 | A0A2I0MSW7 | A0A2I0LL09 | Intraflagellar transport 57. | Intraflagellar transport 172. | 0.988 |
IFT57 | IFT80 | A0A2I0MSW7 | A0A2I0M1C0 | Intraflagellar transport 57. | Intraflagellar transport 80. | 0.986 |
IFT57 | SDCBP2 | A0A2I0MSW7 | A0A2I0M5V7 | Intraflagellar transport 57. | Syndecan binding protein (Syntenin) 2. | 0.530 |
IFT57 | TRAF3IP1 | A0A2I0MSW7 | A0A2I0MIF1 | Intraflagellar transport 57. | TNF receptor-associated factor 3 interacting protein 1. | 0.987 |
IFT80 | IFT172 | A0A2I0M1C0 | A0A2I0LL09 | Intraflagellar transport 80. | Intraflagellar transport 172. | 0.982 |
IFT80 | IFT57 | A0A2I0M1C0 | A0A2I0MSW7 | Intraflagellar transport 80. | Intraflagellar transport 57. | 0.986 |
IFT80 | SDCBP2 | A0A2I0M1C0 | A0A2I0M5V7 | Intraflagellar transport 80. | Syndecan binding protein (Syntenin) 2. | 0.524 |
IFT80 | TRAF3IP1 | A0A2I0M1C0 | A0A2I0MIF1 | Intraflagellar transport 80. | TNF receptor-associated factor 3 interacting protein 1. | 0.977 |
NFASC | SDCBP2 | A0A2I0LZY1 | A0A2I0M5V7 | Neurofascin. | Syndecan binding protein (Syntenin) 2. | 0.627 |
PDCD6IP | SDCBP2 | A0A2I0LZI3 | A0A2I0M5V7 | Programmed cell death 6 interacting protein. | Syndecan binding protein (Syntenin) 2. | 0.749 |
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