STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A306_00006775Protein PML. (586 aa)    
Predicted Functional Partners:
A306_00006777
Protein PML.
  
  
 
0.903
SUMO1
Small ubiquitin-related modifier.
    
 0.869
UBE2I
Ubiquitin-conjugating enzyme E2I; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.800
RNF4
Ring finger protein 4, transcript variant X2.
    
 
 0.609
CREBBP
CREB binding protein.
    
  0.598
MDM2
E3 ubiquitin-protein ligase Mdm2; Belongs to the MDM2/MDM4 family.
    
 0.580
EP300
E1A binding protein p300.
    
  0.535
A306_00004891
Histone acetyltransferase p300-like.
    
  0.535
RUNX3
Runt-related transcription factor.
   
 0.483
RUNX1
Runt-related transcription factor.
   
 0.483
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.