STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THSD4Thrombospondin, type I, domain containing 4. (623 aa)    
Predicted Functional Partners:
B3GLCT
Beta 3-glucosyltransferase.
     
 0.694
POFUT2
Protein O-fucosyltransferase 2.
     
 0.624
TFPI2
Tissue factor pathway inhibitor 2.
 
 
  
 0.587
SPON1
Spondin 1, extracellular matrix protein.
     
 0.565
UMPS
Uridine monophosphate synthetase.
      
 0.518
FBN1
Fibrillin 1.
    
 0.488
DNAH10
Dynein, axonemal, heavy chain 10.
      
 0.463
THSD1
Thrombospondin, type I, domain containing 1.
     
 0.429
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.