STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOX9SRY (Sex determining region Y)-box 9. (291 aa)    
Predicted Functional Partners:
CTNNB1
Catenin (Cadherin-associated protein), beta 1, 88kDa.
    
 0.625
RUNX1
Runt-related transcription factor.
   
 0.596
RUNX2
Runt-related transcription factor.
   
 0.596
MSX1
Msh homeobox 1.
      
 0.583
NR5A1
Steroidogenic factor 1.
    
 0.579
ACAN
Aggrecan.
      
 0.552
DMRT1
Doublesex and mab-3 related transcription factor 1.
    
 0.546
RUNX3
Runt-related transcription factor.
   
 0.544
IHH
HH_signal domain-containing protein.
     
 0.538
SNAI1
Snail family zinc finger 1.
   
 
 0.525
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.