STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CA7Carbonic anhydrase VII, transcript variant X1; Belongs to the alpha-carbonic anhydrase family. (302 aa)    
Predicted Functional Partners:
CCAR1
Cell division cycle and apoptosis regulator protein 1.
      
 0.556
RPF2
Ribosome production factor 2 homolog.
   
 
 0.547
BRD7
Bromodomain containing 7.
   
  
 0.531
HEATR3
HEAT repeat containing 3.
 
    
 0.518
RPL5
Ribosomal protein L5.
    
 
 0.514
A306_00001361
Carbonic anhydrase 2; Belongs to the alpha-carbonic anhydrase family.
  
  
0.430
A306_00001365
Carbonic anhydrase 13; Belongs to the alpha-carbonic anhydrase family.
  
  
0.426
A306_00001362
Carbonic anhydrase 3; Belongs to the alpha-carbonic anhydrase family.
  
  
0.419
CA3
Carbonic anhydrase 3; Belongs to the alpha-carbonic anhydrase family.
  
  
0.414
RPL11
Ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
    
 
 0.406
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.