STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ULK1Unc-51 like autophagy activating kinase 1, transcript variant X1. (984 aa)    
Predicted Functional Partners:
ATG13
Autophagy-related protein 13; Belongs to the ATG13 family. Metazoan subfamily.
   
 0.999
ATG14
Autophagy related 14.
    
 0.998
RB1CC1
RB1-inducible coiled-coil protein 1.
    
 0.998
ATG101
Autophagy related 101, transcript variant X1.
    
 0.995
BECN1
Beclin 1, autophagy related.
    
 0.995
MTOR
Serine/threonine-protein kinase TOR.
    
 0.995
ATG2B
Autophagy related 2B.
   
 0.989
RPTOR
Regulatory associated protein of MTOR, complex 1.
    
 0.986
AMBRA1
Autophagy/beclin-1 regulator 1.
   
 0.973
MLST8
MTOR associated protein, LST8 homolog.
    
 0.968
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.